منابع مشابه
Expressed Sequence Tag-Simple Sequence Repeat (EST-SSR) Marker Resources for Diversity Analysis of Mango (Mangifera indica L.)
In this study, a collection of 24,840 expressed sequence tags (ESTs) generated from five mango (Mangifera indica L.) cDNA libraries was mined for EST-based simple sequence repeat (SSR) markers. Over 1,000 ESTs with SSR motifs were detected from more than 24,000 EST sequences with diand tri-nucleotide repeat motifs the most abundant. Of these, 25 EST-SSRs in genes involved in plant development, ...
متن کاملEST-SSR Marker Sets for Practical Authentication of All Nine Registered Ginseng Cultivars in Korea
Panax ginseng has been cultivated for centuries, and nine commercial cultivars have been registered in Korea. However, these nine elite cultivars are grown in less than 10% of ginseng fields, and there is no clear authentication system for each cultivar even though their values are higher than those of local landraces. Here, we have developed 19 microsatellite markers using expressed gene seque...
متن کاملComparative assessment of EST-SSR, EST-SNP and AFLP markers for evaluation of genetic diversity and conservation of genetic resources using wild, cultivated and elite barleys
A set of 16 expressed sequence tag (EST)-derived simple sequence repeat (SSR) and 15 EST-derived single nucleotide polymorphism (SNP) markers together with 4 amplified fragment length polymorphism (AFLP) primer combinations were analyzed on 43 wild (Hordeum vulgare ssp. spontaneum – HS), 35 cultivated (H. vulgare ssp. vulgare – HV) and 12 elite (H. vulgare ssp. vulgare – from EU) barley lines. ...
متن کاملDevelopment and Characterization of Polymorphic EST-SSR and Genomic SSR Markers for Tibetan Annual Wild Barley
Tibetan annual wild barley is rich in genetic variation. This study was aimed at the exploitation of new SSRs for the genetic diversity and phylogenetic analysis of wild barley by data mining. We developed 49 novel EST-SSRs and confirmed 20 genomic SSRs for 80 Tibetan annual wild barley and 16 cultivated barley accessions. A total of 213 alleles were generated from 69 loci with an average of 3....
متن کاملشناسایی نشانگرهای EST-SSR عدس (Lens culinaris) تحت تنش سرما
توسعه برنامه‌های به‌نژادی عدس برای مقابله با عوامل نامساعد محیطی نسبت به سایر حبوبات، به علت کمبود منابع ژنتیکی با چالش‌های بیشتری روبرو می‌باشد. نشانگرهای EST-SSR به‌دلیل ایجاد چندشکلی در نواحی کدکننده ژن‌ها، یکی از پرکاربردترین نشانگرهای مولکولی در بسیاری از برنامه‌های اصلاحی به‌شمار می‌روند. از این‌رو در تحقیق حاضر به‌منظور توسعه نشانگرهای EST-SSR در مقیاس بالا، از فرآیند سرهم‌بندی مجموعه خو...
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ژورنال
عنوان ژورنال: BMC Plant Biology
سال: 2009
ISSN: 1471-2229
DOI: 10.1186/1471-2229-9-72